[CentOS Stream 8]: Unknown repo crb : [Solved], Failed to download metadata for repo AppStream [CentOS], git push using GitHub token [Deprecating password authentication], Book Tatkal tickets fast using Tatkal for Sure App. Generic Doubly-Linked-Lists C implementation. how to specify which R lib to use when installing a R package? DST Root CA X3 Expiry Invalid Certificate Error on Chrome [Fix], How to fix Failed to synchronize cache for repo appstream, Fix Fatal error: Uncaught exception Exception with message Google PHP API Client requires the CURL PHP extension, Install Qiskit on Windows 10 and Setup Jupyter Notebook. 2. Yes, the *-dev packages don't exist in Arch Linux, so I can't forget it. [ 25%] Building C object CMakeFiles/iio.dir/local.c.o Worked fine on my manjaro machine with just the base-devel group installed. Unfortunately, through yum, i couldnt upgrade php! English version of Russian proverb "The hedgehogs got pricked, cried, but continued to eat the cactus", How to convert a sequence of integers into a monomial. For me, this gives: Answers to some questions suggest adding the path to PKG_CONFIG_PATH. Warning message: "No package libxml-2.0 installed" - Linux Mint Forums "Signpost" puzzle from Tatham's collection. -- Performing Test HAS_O_TMPFILE - Success -- Looking for strerror_r - found Why in the Sierpiski Triangle is this set being used as the example for the OSC and not a more "natural"? Already on GitHub? cd libiio I'm a bit at a loss here, xsltproc is /usr/bin/xsltproc. * checking for gzopen in -lz. R version 3.4.1 (2017-06-30) conda XML . Using libxml2. For Microsoft Windows 64-bit Emacs, the file nt/INSTALL.w64 says this: Run msys2_shell.bat in your MSYS2 directory and you will see a BASH window opened. What differentiates living as mere roommates from living in a marriage-like relationship? Checking directory of LIBXML_INCDIR How can I start PostgreSQL server on Mac OS X? So, any idea where the bug is? checking for pkg-config /usr/bin/pkg-config [1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C Browse other questions tagged, Where developers & technologists share private knowledge with coworkers, Reach developers & technologists worldwide, for libxml++2.6 sudo apt-get install libxml++2.6-dev. devtools::install("./XML", from /usr/include/libxml2/libxml/tree.h:1307, I installed libxml2 with brew and checked a lot of articles, but nothing helped so far. 2019/07/20 configure: error: libxml2 not found. checking for sed /bin/sed No package 'libxml-2.0' found Consider adjusting the PKG_CONFIG_PATH environment variable if you installed software in a non-standard prefix. Futuristic/dystopian short story about a man living in a hive society trying to meet his dying mother. -- Detecting C compiler ABI info - done 2019/07/20 configure: error: libxml2 not found. Please check your How to automatically extend windows virtual disk size [Openstack], No such file or directory c++ Error [CentOS], How to configure Open vSwitch bridge for OpenStack, Too many connections for neutron-db-manage [MySQL], How to manually install higher version of PIP for Python v2.7, [CentOS 7]: Yum install python-pip | No package python-pip available, [OpenStack noVNC]: Code 400, message Client must support binary or base64 protocol [Solved], [CentOS Stream 8]: Error: Unknown repo epel [Solved]. macos - configure script cannot find libxml2 on mac - Stack Overflow Sign up for a free GitHub account to open an issue and contact its maintainers and the community. I have checked the pathname for sysroot and it is most certainly correct. -- Check size of struct usb_functionfs_descs_head_v2 Why does contour plot not show point(s) where function has a discontinuity? Trying to install the XML package as follows I get the error configure: error: "libxml not found". Also: shouldn't not finding libxml already throw an error in cmake? [ 11%] Building C object CMakeFiles/iio.dir/context.c.o I had libxml2 installed but not libxml2-devel. Browse other questions tagged. Interpreting non-statistically significant results: Do we have "no evidence" or "insufficient evidence" to reject the null? Working PATH (for me): /usr/local/sbin:/usr/local/bin:/usr/bin:/var/lib/flatpak/exports/bin:/usr/lib/jvm/default/bin:/usr/bin/site_perl:/usr/bin/vendor_perl:/usr/bin/core_perl. Because configure it self is autogenerated from configure.ac using autotools, one patches configure.ac and can then run autoreconf. -- Looking for stdint.h You can get all the above info by running: brew info libxml2. i have tried to install libxml2 with $ brew install libxml but its says Warning: libxml2-2.9.3 already installed. LAPACK: /home/kkarius/anaconda3/lib/R/lib/libRlapack.so, locale: Browse other questions tagged, Where developers & technologists share private knowledge with coworkers, Reach developers & technologists worldwide. xml.c always uses /usr/include even though I set my own sysroot path. In order to get the libraries and header files necessary for compiling and building, there is usually a separate libXXX-dev package (-dev indicating that the packages are for development). Using libxml2. It only mentions what their values should be, that is why I was curious how you knew that they should be called "LIBXML_CFLAGS" and "LIBXML_LIBS". no checking for xmlParseFile in -lxml2. The header files and library seem to be R itself was installed using anaconda. * I wasn't see anyway to override this false positive libxml1 check, so a hack of a workaround you can use is to patch out that branch of the configure script. ), I had this issue with PHP 7.4 build from source on Ubuntu 16.04 which I fixed by using the same way for OSX suggested above + installing dev package for libxml2-dev. However I do have libxslt installed, e.g. [Scigraphica-devel] ./configure error: libXML not found Asking for help, clarification, or responding to other answers. -- Performing Test HAS_O_TMPFILE -- The C compiler identification is GNU 7.4.0 In the Ubuntu packaging system, the libXXX packages often only contain the runtime libraries necessary for running applications that dynamically link the library. No package 'libxml-2.0' found To subscribe to this RSS feed, copy and paste this URL into your RSS reader. Making statements based on opinion; back them up with references or personal experience. @Parfait launched from the shell directly or also from RStudio, same result. I think there is a problem with the environment variables when you install R through conda. Acoustic plug-in not working at home but works at Guitar Center, Short story about swapping bodies as a job; the person who hires the main character misuses his body. ** package XML successfully unpacked and MD5 sums checked I made sure xml2 and libxml2 are installed (via sudo apt-get install) but that's not enough. checking whether the C compiler works yes PHP :: Bug #79135 :: checking whether to build with LIBXML support If you have specified LIBXML_INCDIR, make certain to also Located parser file /home/***/anaconda3/include/libxml2//parser.h this is the output if make all after cloning the repo and cmake ./: The text was updated successfully, but these errors were encountered: Well, did you install the development files of libxml2? So what include directory does CMake uses for libxml2? What is scrcpy OTG mode and how does it work? compilation terminated. Not the answer you're looking for? it should tell you what environment variables you need to set in order to find libxml2 So, armed with these last two pieces of info, you should be able . -- Looking for stddef.h to your account, phpenv "configure: error: Package requirements (blkid) were not met" By clicking Sign up for GitHub, you agree to our terms of service and https://download.gnome.org/sources/libxml2/2.11/libxml2-2.11.0.tar.xz (2.50M) How a top-ranked engineering school reimagined CS curriculum (Ep. Deprecated several outdated and internal functions. This release finally fixes symbol visibility on UNIX systems. Is there a generic term for these trajectories? @pcercuei correct me if I'm wrong here, but we don't really do anything special with libxml2 in cmake but rely on find_package. // . to your account. Unexpected uint64 behaviour 0xFFFF'FFFF'FFFF'FFFF - 1 = 0? I'm using autoconf 2.69. Makefile:129: recipe for target 'all' failed Also you should know that pgModeler 0.9.2 is packaged in Ubuntu 20.04 LTS at https://packages.ubuntu.com/focal/pgmodeler, so it installable as simple as. Have a question about this project? PHP configure error: xml2-config not found. Check libxml2 installation I'll play around with my PATH and see if I can get it going. If I'm reading this right, the linker cannot find the lib xml2. -- Looking for pthread_setname_np - found 565), Improving the copy in the close modal and post notices - 2023 edition, New blog post from our CEO Prashanth: Community is the future of AI. Located parser file -I/home/kkarius/anaconda3/include/libxml2 -I/home/kkarius/anaconda3/include/parser.h SED_EXTENDED_ARG: -E /usr/local/Cellar/libxml2/2.9.3/lib/pkgconfig and /usr/local/Library/ENV/pkgconfig/. Here is the full error message : configuring libxml-libxml-perl (2.0108+dfsg-1ubuntu0.1) . compilation terminated. [ubuntu] could not be find the libxml2 Looking for job perks? I suspect that libusb is also being found in /usr/lib. -- Looking for strdup checking for gzopen in -lz no So I'm not sure if this correct behaviour, since the libxml & libusb are both in the sysroot specified in the cmake line. To subscribe to this RSS feed, copy and paste this URL into your RSS reader. (Related homebrew issue: "libxml2 install path".). Why does Acts not mention the deaths of Peter and Paul? Looking for job perks? Literature about the category of finitary monads. xml2 installed but not found during compilation - Ask Ubuntu Does a password policy with a restriction of repeated characters increase security? Looking for job perks? Please check your libxml2 installation. Are there any canonical examples of the Prime Directive being broken that aren't shown on screen? How can I control PNP and NPN transistors together from one pin? long story short: if "/bin" is in your PATH, cmake doesn't work correctly. You signed in with another tab or window. mismatched. Make sure it is in your PATH or set the PKG_CONFIG environment variable to the full path to pkg-config. 565), Improving the copy in the close modal and post notices - 2023 edition, New blog post from our CEO Prashanth: Community is the future of AI. The error message suggested configure: error: "libxml not found", but. By clicking Accept all cookies, you agree Stack Exchange can store cookies on your device and disclose information in accordance with our Cookie Policy. I have nearly no idea about cmake, so I probably didn't find out everything, but the file that gets created with the include path seems very wrong: These paths should be /usr/inlucde/libxml2. On what basis are pardoning decisions made by presidents or governors when exercising their pardoning power? [OpenStack Glance]: Failed to contact the endpoint at https://localhost:9292 for discovery. Yes, i think it is looking for libxml-2.0.pc in /usr/lib/pkgconfig/ direcotry, but it is not there. How to check for #1 being either `d` or `h` with latex3? > biocLite("XML") provides a separate development package or SDK, be sure it has been By not providing "FindPython.cmake" in CMAKE_MODULE_PATH this project has About 90 memory errors in code paths handling malloc failures have been fixed. -- Looking for libusb_get_version You can check what development packages are available for a particular library using the apt-cache search engine e.g. How to combine several legends in one frame? -- Performing Test HAS_WPEDANTIC Check libxml2 installation on CentOS/RHEL/Fedora. Could you please promote your comment as an answer so I can mark it as such? error: linking with `cc` failed: exit code: 1 (a long list of linker args follows) note: /usr/bin/ld: cannot find -lxml2 If I'm reading this right, the linker cannot find the lib xml2. Easy way of installing it is using yum by issuing the following command on your CentOS/Fedora/RHEL Linux distributions. How to access WhatsApp through Chrome Web browser? Why typically people don't use biases in attention mechanism? Stack Exchange network consists of 181 Q&A communities including Stack Overflow, the largest, most trusted online community for developers to learn, share their knowledge, and build their careers. https://webkaru.net/linux/configure-error-xml2-config-found-please-check-libxml2-installation/. checking for gcc gcc For trying out wordpress 3.8 installation, i had to upgrade my php installation from 5.1.6 to 5.2.4 or later version. I made sure xml2 and libxml2 are installed (via sudo apt-get install) but that's not enough. downloaded 1.5 MB, * installing *source* package XML What are the advantages of running a power tool on 240 V vs 120 V? Easy way of installing it is using yum by issuing the following command on your CentOS/Fedora/RHEL Linux distributions. [ 11%] Building C object CMakeFiles/iio.dir/device.c.o On whose turn does the fright from a terror dive end? Content type 'application/x-gzip' length 1599437 bytes (1.5 MB) I installed R using apt-get. I am trying to install the XML package via BiocLite, which I need for various other packages. args = "--configure-args='--with-libxml2'") Connect and share knowledge within a single location that is structured and easy to search. To learn more, see our tips on writing great answers. So you have to specify the location of libxml2 when you run ./configure, just as brew and libvisio tell you to: (The paths on your system may vary, so do check! The text was updated successfully, but these errors were encountered: The issue here isn't that you're missing xsltproc, but that you're missing the Autotools macro AX_PROG_XSLTPROC which looks for xsltproc. Configure failure, cannot find xsltproc Issue #1 dankamongmen Sign up for a free GitHub account to open an issue and contact its maintainers and the community. CMake Warning at bindings/python/CMakeLists.txt:4 (find_package): symbols will now be hidden. The XInclude engine has been reworked to properly support nested includes. https://packages.ubuntu.com/focal/pgmodeler. When a gnoll vampire assumes its hyena form, do its HP change? I'm trying to figure out what needs to be done to make the configure script happy with libxml2 because libxml-2.0 isn't available. So how can i add libxml-2.0.pc in /usr/lib/pkgconfig/. I'm unable to determine which is the right version (libxml or libxml2) for 14.04 but you'll want to make sure you have the -dev version installed. I've updated the README to explicitly mention this dependency. I have added all dependancy described there listed bellow: After adding dependancies i am trying to run bellow commands. Embedded hyperlinks in a thesis or research paper. rev2023.4.21.43403. I had already pkg-config installed but the path was pointing to correct location (AWS instance). 565), Improving the copy in the close modal and post notices - 2023 edition, New blog post from our CEO Prashanth: Community is the future of AI. trying URL 'https://cran.rstudio.com/src/contrib/XML_3.98-1.9.tar.gz' mkdir build Your post saved me, thank you! By clicking Post Your Answer, you agree to our terms of service, privacy policy and cookie policy. What to do? configure script cannot find libxml2 on mac. It doesn't mention the names "LIBXML_CFLAGS" and "LIBXML_LIBS" as far as I can see. Why are players required to record the moves in World Championship Classical games? It only takes a minute to sign up. To reproduce your problem I installed Anaconda3 4.4.0 on RedHat 7.4, then: Use of this site constitutes acceptance of our User Agreement and Privacy Here are my steps and the results. no checking for xmlParseFile in -lxml. Which was the first Sci-Fi story to predict obnoxious "robo calls"? Already on GitHub? Interpreting non-statistically significant results: Do we have "no evidence" or "insufficient evidence" to reject the null? microsoft windows - eww ---> libxml2 library not found - Emacs Stack Now this wont work. The best answers are voted up and rise to the top, Not the answer you're looking for? no checking for xmlParseFile in -lxml. Excellent :-) Good luck with your project! -- Detecting C compile features linux - No package 'libxml-2.0' found - Stack Overflow like I said, libxml2 and libxml2-dev are already on the system. I suspect that libusb is also being found in /usr/lib. So, why would I get "No package 'libxml2.0' found", and how might I fix this? By clicking Post Your Answer, you agree to our terms of service, privacy policy and cookie policy. Sign up for a free GitHub account to open an issue and contact its maintainers and the community. BLAS: /home/kkarius/anaconda3/lib/R/lib/libRblas.so Package libxml2.0 was not found in the pkg-config search path. Can you still use Commanders Strike if the only attack available to forego is an attack against an ally? Running under: CentOS Linux 7 (Core), Matrix products: default In file included from /usr/include/libxml2/libxml/parser.h:810:0, Connect and share knowledge within a single location that is structured and easy to search. -- Looking for libusb-1.0 : Found Realistically they should be interchangeable packages. Can you still use Commanders Strike if the only attack available to forego is an attack against an ally? I run CentOS and have installed the libxml-devel package via yum which is encouraged online. Policy. -- Check size of struct usb_functionfs_descs_head_v2 - done [ 22%] Building C object CMakeFiles/iio.dir/sort.c.o The problem is it's looking for libxml-2.0, not libxml2. Don't subscribeAllReplies to my comments @ N0rbert - that's really useful information and is helping me progress, thanks. Why xargs does not process the last argument? Content Discovery initiative April 13 update: Related questions using a Review our technical responses for the 2023 Developer Survey, Error installing R 2.13.0 packages (caret) on Ubuntu 10.04, Unable to compile xps after installing ROOT, missing libraries, RCDK package installation fails in R studio. Error installing the stringi package on R 4 on Linux Ubuntu, Having Trouble Downloading Tidyverse in R. What was the actual cockpit layout and crew of the Mi-24A? add explicit note about dependency on autotools-archive, resolving Gi, https://nick-black.com/bugzilla/show_bug.cgi?id=543. Thanks! link errors with --no-undefined-version. Thanks for contributing an answer to Ask Ubuntu! make[2]: *** [CMakeFiles/iio.dir/xml.c.o] Error 1. To subscribe to this RSS feed, copy and paste this URL into your RSS reader. Learn more about Stack Overflow the company, and our products. sequential (one-line) endnotes in plain tex/optex. Please check your libxml2 installation. The pasted message is from Brew. "Python_DIR" to a directory containing one of the above files. -- Looking for sys/types.h - found git clone https://github.com/analogdevicesinc/libiio.git no >>configure: erroe: *** libxml >= 1. . Will check out your README and see if this fits in my project scope, which I think it should. make[1]: *** [CMakeFiles/iio.dir/all] Error 2 -- Found FLEX: /usr/bin/flex (found version "2.6.4") Can the game be left in an invalid state if all state-based actions are replaced? It'd really be nice to figure out a better way to do this. What did help was to install libxml through conda using. make: *** [all] Error 2. sorry for going dark on this one, I realized it was probably a problem with cmake or some other component. Making statements based on opinion; back them up with references or personal experience. I can build libiio using "make all", but then "make install" fails trying to write to /usr/lib even though I've specified my own sysroot in the cmake line. If "Python" Content Discovery initiative April 13 update: Related questions using a Review our technical responses for the 2023 Developer Survey, Pipe to/from the clipboard in a Bash script. Can someone explain why this point is giving me 8.3V? Sign up for a free GitHub account to open an issue and contact its maintainers and the community. Upgrade Node.js to the latest version on Mac OS, Incompatible library version: nokogiri.bundle requires version 8.0.0 or later, but libiconv.2.dylib provides version 7.0.0, "code ." CMakeFiles/iio.dir/build.make:302: recipe for target 'CMakeFiles/iio.dir/xml.c.o' failed >>Still the configure script stops with this erroe: >>checking for xmlSAXUserParseFile. -- Found BISON: /usr/bin/bison (found version "3.0.4") Was there any resolution to this problem? -- Found Git: /usr/bin/git (found version "2.17.1") configure: error: Package requirements ( libxml-2.0 ) were not met: No package 'libxml-2.0' found Consider adjusting the PKG_CONFIG_PATH environment variable if you installed software in a non-standard prefix. checking for gcc option to accept ISO C89 none needed [7] LC_PAPER=en_US.UTF-8 LC_NAME=C -- Generating done To my unluck, i ran into following errors: The quick solution to the above problem is you need to install libxml2-devel package. By clicking Accept all cookies, you agree Stack Exchange can store cookies on your device and disclose information in accordance with our Cookie Policy. I have libxml2 version 2.9.9-2 installed with cmake 3.15.4 on my Manjaro system. pthread library not found; support for threads will be disabled. A freelance writer on latest trends in technology, gadget reviews, How to's and many more. I've corrected -libs to --libs (initial error from copying and pasting via MS Word). [ 2%] Building C object CMakeFiles/iio.dir/backend.c.o Checking directory of LIBXML_INCDIR Located parser file /opt/lampp/include/parser.h Checking for 1.8: /opt/lampp/include Using libxml2. Making statements based on opinion; back them up with references or personal experience. libxml2-dev Could a subterranean river or aquifer generate enough continuous momentum to power a waterwheel for the purpose of producing electricity? -- Looking for newlocale - found You signed in with another tab or window. Understanding the probability of measurement w.r.t. What is this brick with a round back and a stud on the side used for? Thanks for pointing this out as I've kind of been stuck on this for a bit trying to do it from CMake within my project. make[2]: *** [CMakeFiles/iio.dir/xml.c.o] Error 1 privacy statement. Configuration failed because libxml-2.0 was not found. How a top-ranked engineering school reimagined CS curriculum (Ep. asked CMake to find a package configuration file provided by "Python", but privacy statement. [1] stats graphics grDevices utils datasets methods base, other attached packages: This doesn't work for me. -- Looking for stddef.h - found Xml2 package installation issues - pkg-config PATH help [ 30%] Building C object CMakeFiles/iio.dir/xml.c.o ERROR: configuration failed for package XML Sign in Why can pkg-config not find gsettings-desktop-schemas? ** package XML successfully unpacked and MD5 sums checked Making statements based on opinion; back them up with references or personal experience. configure: error: "libxml not found" Order relations on natural number objects in topoi, and symmetry. To learn more, see our tips on writing great answers. Site design / logo 2023 Stack Exchange Inc; user contributions licensed under CC BY-SA. PHP :: Bug #80667 :: checking for libxml-2.0 >= 2.7.6 no Checking for 1.8: /home/***/anaconda3/include/libxml2/ ^ libraries make Share Improve this question Follow Can I connect multiple USB 2.0 females to a MEAN WELL 5V 10A power supply? libxml >>installed was1.8.3, did not work so I installed libxml2 2.2.2 >>and libxml2-devel 2.2.2. i.e. What's the cheapest way to buy out a sibling's share of our parents house if I have no cash and want to pay less than the appraised value? If pkg-config [5] LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8 thank you so much. -- Looking for libusb_get_version - found Looks like the new markdown functionality is affecting the last section`# Install XML` with an `a href` tags, but looks normal when I try to edit the post. Start here for a quick overview of the site, Detailed answers to any questions you might have, Discuss the workings and policies of this site. Updating HTML index of packages in '.Library' I used sudo apt-get install libxml2-dev and it seemed to install ok. ================================================== rev2023.4.21.43403. What is this brick with a round back and a stud on the side used for? Perhaps you should add the directory containing 'libxml2.0.pc' to the PKG_CONFIG_PATH environment variable No package 'libxml2.0' found Answers to some questions suggest adding the path to PKG_CONFIG_PATH. R -q --vanilla < Well occasionally send you account related emails. Can someone explain why this point is giving me 8.3V? Installing package(s) XML -- Performing Test WITH_NETWORK_EVENTFD - Success By clicking Accept all cookies, you agree Stack Exchange can store cookies on your device and disclose information in accordance with our Cookie Policy. ^ To learn more, see our tips on writing great answers. Using an Ohm Meter to test for bonding of a subpanel. checking for xmlParseFile in -lxml no checking for suffix of object files o Using Bioconductor 3.5 (BiocInstaller 1.26.1), R 3.4.1 (2017-06-30). checking for suffix of executables To learn more, see our tips on writing great answers. and false positives should be reduced. Policy. Scanning dependencies of target iio Can you still use Commanders Strike if the only attack available to forego is an attack against an ally? -- Performing Test HAS_WPEDANTIC - Success Ah, so you're using Anaconda's R distribution. [ 5%] Building C object CMakeFiles/iio.dir/channel.c.o It should be /usr/include/libxml2. [3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8 Ubuntu and the circle of friends logo are trade marks of Canonical Limited and are used under licence. checking whether gcc accepts -g yes I started with a fresh copy of the LibIIO repo and re-ran cmake.